BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F10LP1|AL430094
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1828 0.0
>3x_Contig1737
Length = 17214
Score = 1828 bits (919), Expect = 0.0
Identities = 930/935 (99%), Gaps = 1/935 (0%)
Strand = Plus / Plus
Query: 7 acacaggataattactaatggtaaaaagagtgcatatcaacaggtccgatgattgaagtc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 acacaggataattactaatggtaaaaagagtgcatatcaacaggtccgatgattgaagtc 537
Query: 67 ttggcagttgaaatgctacgatatccccggagatcaaggagatgccgtccgaacaaaacc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttggcagttgaaatgctacgatatccccggagatcaaggagatgccgtccgaacaaaacc 597
Query: 127 aaattacctaagtgcacttgtgtatttatacatggtggagcatatcgtattgacgttgat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aaattacctaagtgcacttgtgtatttatacatggtggagcatatcgtattgacgttgat 657
Query: 187 gaatttgacacaggccacgtgactgggtgtcgaatcatcgtccgamattcaacagccgca 246
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 658 gaatttgacacaggccacgtgactgggtgtcgaatcatcgtccgaaattcaacagccgca 717
Query: 247 caccccaccagaaacgacttggaaacatcaaagatgtcgctgtagcgttggaaacagagg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caccccaccagaaacgacttggaaacatcaaagatgtcgctgtagcgttggaaacagagg 777
Query: 307 gtgcgggactatatccaacacagctaaagggctacagggctggtggggcagatggctagt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gtgcgggactatatccaacacagctaaagggctacagggctggtggggcagatggctagt 837
Query: 367 actaaggccggtacaggtcgtatatcttggatctgaccacattccattgcgaa-caagaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 838 actaaggccggtacaggtcgtatatcttggatctgaccacattccattgcgaagcaagaa 897
Query: 426 ctcattaagggtgtcaaaacggtgaaaaatgtggttgtaaattcctttttatagaaggac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 ctcattaagggtgtcaaaacggtgaaaaatgtggttgtaaattcctttttatagaaggac 957
Query: 486 tgcagcagcaaacgtctctgataaacaaggacaagcagggtattcccaggtgtcgcgtaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 tgcagcagcaaacgtctctgataaacaaggacaagcagggtattcccaggtgtcgcgtaa 1017
Query: 546 aamatggcatcagtgatattccacccaagttattgtgccaaamagtagatgtaatgtata 605
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1018 aaaatggcatcagtgatattccacccaagttattgtgccaaaaagtagatgtaatgtata 1077
Query: 606 tgtgttgtgtttatgtaaacggtttctgtttatggtgtggtgtattgaattatcgggtgt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 tgtgttgtgtttatgtaaacggtttctgtttatggtgtggtgtattgaattatcgggtgt 1137
Query: 666 ctgtgaatctttgtaattagtactcgaccataattgtcgttggtgtcgtcagcaagatat 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 ctgtgaatctttgtaattagtactcgaccataattgtcgttggtgtcgtcagcaagatat 1197
Query: 726 ataaatggggtttatctctgatgagtaagagatatactgttgttttaagaagtatgatgt 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1198 ataaatggggtttatctctgatgagtaagagatatactgttgttttaagaagtatgatgt 1257
Query: 786 caaatgcataggtaagtctcatcgacaaattcccttccagtattctacgatatgctcaaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 caaatgcataggtaagtctcatcgacaaattcccttccagtattctacgatatgctcaaa 1317
Query: 846 tttagcagaacattcacgacattsagcagactttcatcaagagctgtttccaacagggta 905
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1318 tttagcagaacattcacgacattcagcagactttcatcaagagctgtttccaacagggta 1377
Query: 906 attatccctccaaaagcgttgactgatcttggaca 940
|||||||||||||||||||||||||||||||||||
Sbjct: 1378 attatccctccaaaagcgttgactgatcttggaca 1412
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5480
Number of Sequences: 1807
Number of extensions: 5480
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)